WholeCellViz.org is a web-based software program for visually analyzing whole-cell simulations.

WholeCellViz enables users to interactively analyze many aspects of cell physiology including:

  • Cell mass, volume, and shape,
  • Metabolite, RNA, and protein copy numbers,
  • Metabolic reaction fluxes,
  • Molecular machine statuses – DNA polymerase, RNA polymerase, ribosome, FtsZ ring, and the
  • Chromosome copy number, superhelicity, integrity, and DNA binding status.