https://youtu.be/OJmqtJey4zg ObjTables is a community initiative to make supplementary spreadsheets to journal articles - one of the most common methods for sharing scientific data - more reusable. The long-term goal is to create an ecosystem of reusable data for comparative and integrative research. ObjTables combines the ease of use of spreadsheets (XLSX file [...]
Danator is an integrated database of molecular data designed to facilitate integrative analysis of multiple cellular subsystems. To help investigators overcome the lack of complete data about every molecule and reaction in every organism, Datanator includes tools for building "clouds" of data that include data about chemically similar molecules and reactions in phylogenetically similar [...]
PLOS Computational Biology has announced the official launch of their Reproducibility Modelling pilot, in collaboration with the Center for Reproducible Biomedical Modelling, The aim is to support improved reproducibility of systems biology or physiology-based models that are submitted to PLOS Computational Biology. Authors with relevant models in their manuscript will be able to take part in [...]
The scholarly publishing community is responding with positive support to global leaders' request for making COVID-19 related research available to everyone. The CRBM also supports this unprecedented effort to share research that can help foster positive solutions in this moment of global need. We believe sharing such research across peer-review journals and all outlets will [...]
Researchers across all sectors have joined in the request from the White House and have formed CORD-19, the COVID-19 Open Research Dataset. "This valuable new resource is the fruit of unselfish collaboration and now offers the opportunity to find answers to important questions about COVID-19,” said Dr. Dewey Murdick, Director of Data Science at Georgetown [...]
The Interagency Modeling and Analysis Group (IMAG) has published an article of interest regarding research on COVID-19. The director of the White House’s Office of Science and Technology Policy (OSTP) and government scientists from countries around the world are calling for publishers to make COVID-19-related research available to the public including in formats where they [...]
The International Conference on Systems Biology (ICSB) is a premier conference series in systems biology, organized by the International Society for Systems Biology and hosted by leading research institutions around the world. The most recent ICSB were held in Japan (2019), France (2018), USA (2017), and Spain (2016). ICSB 2020 will be held in Hartford, [...]
We are pleased to announce the 2020 Combined Multi-Scale Modeling of Biological Systems Modular Summer School + Hackathon at IU-Bloomington. Components include Network Modeling Summer School Mon-Thurs, July 27-July 30, 2020 Network Modeling Hackathon Fri-Sun, July 31-August 2, 2020 Virtual-Tissue Modeling Summer School Mon-Thurs, August 3-August 6, 2020 Virtual-Tissue Modeling Hackathon Mon-Thurs, August 3-August 6, [...]
The Center for Reproducible Biomedical Modeling invites you to participate in a monthly online cell modeling seminar beginning Tuesday, January 14. Multi-scale models require the representation and integration of a diverse list of biological processes (e.g. RNA expression, protein signaling, metabolism, cell growth, etc.) and modeling each process contains its own unique challenges. Each month [...]
Registration for HARMONY 2020 is now open! HARMONY 2020 will take place on March 09 -13, 2020, in Cambridge, UK, at the campus of the European Bioinformatics Institute, European Molecular Biology Laboratory (EMBL-EBI). HARMONY is a codefest-type meeting, with a focus on the development of the standards, interoperability, and infrastructure for computational modeling in biology. [...]
