libRoadRunner version 1.4.18 released

August 24th, 2017|

Prof. Sauro released an updated version (1.4.18) of the libRoadRunner high-performance simulation engine.

“Systems Biology: Introduction to Pathway Modeling” updated

August 24th, 2017|

Prof. Sauro has released an updated version of his textbook "Systems Biology: Introduction to Pathway Modeling"

“Enzyme Kinetics for Systems Biology” updated

August 24th, 2017|

Prof. Sauro has released an updated version of his textbook "Enzyme Kinetics for Systems Biology"

“An introduction to whole-cell modeling” available online

August 24th, 2017|

Profs. Karr and Goldberg are writing a comprehensive primer on whole-cell modeling, both to train their lab and teach the community. It covers the fundamentals of cell modeling, including data aggregation and organization; model design, [...]

Survey of the goals and needs of biomodeling

August 24th, 2017|

Dear colleague, We would like to invite you to participate in a survey of the goals, methods, and challenges of biomodeling. The goal of the survey is to solicit your input into the biomodeling community's [...]

SBML Test Suite v3.2.0 released

July 29th, 2016|

The new releaseĀ of the SBML Test Suite test cases includes the DSMTS, and new syntactic cases.

Online SBML Validator updated

May 24th, 2016|

The Online SBML Validator now supports draft LevelĀ 3 packages. It is also faster.

BioModels v30 released

May 10th, 2016|

Release 30 features 1,483 models!

libSBML v5.13.0 released

April 14th, 2016|

Adds support for SBML Level 3 Groups, fixes bugs, and more.

SBML Level 3 Groups v1 ratified

April 5th, 2016|

Version 1 of the SBML Level 3 package for Groups has been ratified!

KEGGtranslator v2.5 released

September 17th, 2015|

This release brings support for SBML Level 2 Version 5, references, SBML extensions such as the new flux balance constraints (FBC) package and the groups extension, an improved user interface and several bug fixes.

SBMLsqueezer v2.1 released

August 10th, 2015|

SBMLsqueezer can now deal with Level 2 Version 5 and Level 3 Version 1 including all current extension packages.