Gold Standard Models
As part of the CRBM’s annotation and simulation service, we have selected the following models which abide by the agreed standards and annotation practices as defined in Annotation Protocol. These models cover a wide [...]
H1 human embryonic stem cell whole-cell model
The H1 human embryonic stem cell (hESC) model is the first step toward whole-cell models of human cells. The model will represent the core cellular functions of all human cells including their metabolism, DNA replication, [...]
Mycoplasma genitalium whole-cell model
The M. genitalium whole-cell model was the first model that represented each characterized gene function of an organism. The model is composed of 28 submodels of 28 cellular processes. In total, the model represents the [...]
Mycoplasma pneumoniae whole-cell model
The Mycoplasma pneumoniae whole-cell model will be the most comprehensive, most systematically constructed, and most extensible whole-cell model to date. The model will represent all of the major cellular functions of M. pneumoniae, including the [...]
Random WC model generator
The Random Whole-cell model generator is a tool for generating WC models that represent user-specified numbers of genes, RNA, proteins, and reactions of an archetypal bacterium. The models generated by the model generator represent [...]