Following the success of the 2023 BioModels "Model of The Year", applications are open for the 2024 BioModels "Model of The Year". The application deadline is 29th February 2024 More details here: https://www.ebi.ac.uk/biomodels/competition/model-of-the-year-2024 The competition aims to recognize exciting mathematical models of biological systems and the modelers who build them. This is an excellent opportunity for early career [...]
Registration is now open for HARMONY 2024! Save the date for Harmony 2024 Date: April 8th to April 11th, 2024 Place: Centre For Medical Image Computing, University College London, 90 High Holborn, London, WC1V 6LJ. HARMONY 2024 will be an in-person meeting. The Computational Modeling in Biology Network (COMBINE) is an initiative to coordinate the [...]
Announcing the 9th International Conference on Systems Biology of Mammalian Cells SBMC 2024 on 13 – 15 May in Leipzig: “Translating Systems Medicine into the Clinics” Abstract submission is now open until 20 February! Please find all the information on the conference website: www.lisym-cancer.org/sbmc2024 The scientific program offers diverse sessions: From single-cell analysis to clinical [...]
24th Annual Workshop on Computational Cell Biology will take place June 26-28, 2023 at the Center for Cell Analysis and Modeling at UConn. The workshop is free. However, to be admitted please email the following information to blinov@uchc.edu or les@uchc.edu by Jan. 13: Your name, institution, lab head (if you are a student), research field and responses to the [...]
The International Conference on Systems Biology (ICSB) is a premier conference series in systems biology, organized by the International Society for Systems Biology and hosted by leading research institutions around the world. ICSB 2023 will be held at the Connecticut Convention Center in Hartford, CT (U.S.), October 8th through October 12th. There will be [...]
The “Computational Modeling in Biology” Network (COMBINE) is an initiative to coordinate the development of the various community standards and formats in systems biology and related fields. COMBINE 2023 will be a workshop-style event hosted at the Center for Cell Analysis and Modeling at the University of Connecticut School of Medicine, Farmington, CT, USA. The [...]
Ratesb is a web tool that accepts SBML or antimony encoded models and checks the model rate laws for errors or provides warnings for rate laws that are unusual. Ratesb
Vscode-Antimony is a Visual Studio Code Extension Tool that adds language support for Antimony for building models in Systems Biology which makes it convenient to work simultaneously with the Antimony and Systems Biology Markup Language (SBML) representations of models. Vscode-Antimony provides syntax recognition, hover messages for displaying information (e.g., display name, annotation link, initialized [...]
makeSBML is a web tool that makes it easy to create SBML models or to translate SBML models into the more readable Antimony format. As an example, copy the following text into the left panel and click on the right-arrow button: "A -> B; k1*A; k1 = 0.1" makeSBML
Curvenote Launches New Scientific Journal with the Physiome Project Curvenote, a new publishing platform and writing tool designed for scientists in the age of open science, has launched their first scientific journal with the Physiome Project. The open-access journal, which focuses on mathematical models of physiological processes, aims to promote reproducibility and open science by [...]
