Hunter Robbins

About Hunter Robbins

This author has not yet filled in any details.
So far Hunter Robbins has created 89 blog entries.

BioSimulators paper just published in Nucleic Acids Research

We're glad to share information from a new paper just published in Nucleic Acids Research: BioSimulators: a central registry of simulation engines and services for recommending specific tools. https://academic.oup.com/.../doi/10.1093/nar/gkac331/6582178. “BioSimulators provide streamlined abilities to find, obtain, and use simulation tools for a broad range of modeling frameworks, formats, and algorithms, to help make systems biology, [...]

2022-05-10T20:48:12-07:00May 10th, 2022|Front Page News, News|
Read More

2022 Network Modeling Virtual Summer School & Symposium

Click to download Flyer You are invited to attend a week-long summer school on network modeling, which will conclude with a symposium of research and modeling tool talks to demonstrate how the skills you learn are being used in research settings. This summer school is designed to take beginner and intermediate level modelers [...]

2022-07-28T17:43:46-07:00May 6th, 2022|Front Page News, News|
Read More

2022 PhysiCell Workshop Hackathon Registration is Open

Applications for the 2022 PhysiCell workshop/hackathon are now OPEN! This virtual course will teach concepts of agent-based biological simulations, through our open-source PhysiCell package. Sessions include integrating intracellular models, such as Boolean networks, systems of reactions (SBML), flux balance models, and pre-trained deep neural network surrogate models. The organizers also plan to introduce a new [...]

2022-05-02T19:50:32-07:00April 26th, 2022|Front Page News, News|
Read More

Read The Center’s First Biannual Newsletter!

The Center's first biannual newsletter is now available! The newsletter describes the CRBM's recent progress in the creation of new tools, its outreach efforts to the larger community, as well as ongoing partnerships with journals for more reproducible science. It also features Lucian Smith, one of the main authors behind SED-ML and parody songwriter [...]

2024-07-05T20:41:54-07:00March 12th, 2022|Front Page News, News|
Read More

IMAG Webinar on Team Mindset takes place March 3rd

Dr. L. Michelle Bennett is currently serving as the Chief Collaboration Officer of LMBennett Consulting where she focuses on helping individuals, teams and organizations create the capacity for more productive partnerships and innovation in team science. Diversity in team science has emerged as a critical element in successful research outcomes, especially in computational [...]

2022-07-26T16:06:09-07:00February 11th, 2022|Front Page News, News|
Read More

BioSimulations

BioSimulations is a free platform for sharing and re-using biomodels, simulations, simulation results, and visualizations of simulation results. BioSimulations supports a wide range of frameworks (e.g., logical, Flux-Balance Analysis (FBA), continuous kinetic, discrete kinetic), simulation algorithms (e.g., FBA, SSA), model formats (e.g., SBML), and tools (e.g., COBRApy, COPASI, tellurium). BioSimulations, developed by Jonathan Karr, [...]

2022-07-27T19:57:04-07:00February 2nd, 2022|Online simulation and visualization|
Read More

runBioSimulations

runBioSimulations is a free tool for running a wide range of biological simulations. Through the BioSimulators registry of biosimulation tools, runBioSimulations supports a broad range of modeling frameworks (e.g., logical, kinetic), simulation algorithms (e.g., FBA, SSA), modeling formats (e.g., SBML, SED-ML), and simulation tools (e.g., COBRApy, COPASI). run.biosimulations.org

2022-07-26T19:09:16-07:00December 20th, 2021|Online simulation and visualization|
Read More

BioSimulators

BioSimulators is a free registry of biosimulation tools. The registry includes tools for a broad range of frameworks (e.g., logical, kinetic), simulation algorithms (e.g., FBA, SSA), and model formats (e.g., BNGL, CellML, NeuroML/LEMS, SBML, Smoldyn). Many of the simulation tools provide Python packages, command-line programs, and Docker images with consistent interfaces. Together, BioSimulators makes it [...]

2022-07-26T18:31:01-07:00December 2nd, 2021|Online simulation and visualization|
Read More

Peer Community Journal

We're glad to share information about Peer Community Journal, a community-based, diamond open-access journal that publishes only articles recommended by @PeerCommunityIn. Pear Community Journal was created and funded by the not-for-profit and non-commercial “Peer Community In” organization, publishes PCI-recommended articles in open access, without further peer review, at no cost to the authors. The evaluation of [...]

2021-11-30T17:24:18-08:00November 29th, 2021|Front Page News, News|
Read More

Biologically Informed Models of Combination Therapies: January 24-28, 2022

Combination Therapies for Cancer Treatments - Ideas Lab The National Cancer Institute’s Division of Cancer Biology (NCI DCB) and IBM Research are partnering to build a Community of Accelerated Discovery composed of a multi-disciplinary group of researchers focused on the discovery implications of clinical translation of biologically informed combination therapies for cancer. The over-arching goal [...]

2021-11-22T16:56:01-08:00November 22nd, 2021|Front Page News, News|
Read More
Go to Top